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Protein Prediction I Beginners (IN2221)

Course 821093429 in SS 2014

General Data

Course Type Lecture w/ Exercise
Semester Weekly Hours 6 SWS
Organisational Unit Informatics 12 - Chair of Bioinformatics (Prof. Rost)
Lecturers
Dates

Assignment to Modules

Further Information

Courses are together with exams the building blocks for modules. Please keep in mind that information on the contents, learning outcomes and, especially examination conditions are given on the module level only – see section "Assignment to Modules" above.

additional remarks Intro: what is protein function? Predicting protein function using sequence: sequence alignments, multiple sequence alignments, motifs, domain assignment, annotation transfer by homology, ab initio predictions. Predicting protein function using structure: structural alignments, structural motifs, annotation transfer via structure similarity. From structure prediction to function prediction: comparative modeling; prediction of: secondary structure, hydrophilicity profiles, solvent accessibility, transmembrane segments, disordered regions, contact maps, functional residues; template free modeling. Machine learning.
Links Course documents
TUMonline entry

Equivalent Courses (e. g. in other semesters)

SemesterTitleLecturersDates
SS 2022 Protein Prediction I for Bioinformaticians (IN2221) Richter, L. Rost, B. Tue, 12:00–14:00, MI 01.09.034
Thu, 12:00–14:00, MI 01.09.034
Thu, 14:00–15:30, MI 01.09.034
SS 2021 Protein Prediction I Advanced (IN2221) Richter, L. Rost, B. Tue, 12:00–14:00, virtuell
Thu, 12:00–14:00, virtuell
Thu, 14:00–16:00, virtuell
SS 2020 Protein Prediction I Advanced (IN2221) Richter, L. Rost, B. Tue, 12:00–14:00, MI 01.09.034
Thu, 12:00–14:00, MI 01.09.034
Thu, 14:00–15:30, MI 01.09.034
SS 2019 Protein Prediction I Advanced (IN2221) Richter, L. Rost, B. Tue, 12:00–14:00, MI 01.09.034
Thu, 12:00–14:00, MI 01.09.034
Thu, 14:00–15:30, MI 01.09.034
SS 2018 Protein Prediction I Advanced (IN2221) Richter, L. Rost, B. Tue, 12:00–14:00, MI 01.09.034
Thu, 12:00–14:00, MI 01.09.034
Thu, 14:00–15:30, MI 01.09.034
SS 2017 Protein Prediction I Advanced (IN2221) Richter, L. Rost, B. Tue, 12:30–14:00, MI 01.09.034
Thu, 12:30–14:00, MI 01.09.034
Thu, 14:00–15:30, MI 01.09.034
SS 2016 Protein Prediction I Advanced (IN2221) Tue, 12:30–14:00, MI 01.09.034
Thu, 12:30–14:00, MI 01.09.034
Thu, 14:00–15:30, MI 01.09.034
SS 2015 Protein Prediction I Advanced (IN2221) Tue, 12:30–14:00, MI 01.09.034
Thu, 12:30–14:00, MI 01.09.034
Thu, 14:00–15:30, MI 01.09.034
SS 2015 Protein Prediction I Beginners (IN2322)

Thu, 12:30–14:00, MI HS3
Thu, 12:30–14:00, MI HS2
SS 2014 Protein Prediction I Advanced (IN2221)
SS 2013 Protein Prediction I Advanced (IN2221)
SS 2013 Protein Prediction I Beginners (IN2221)
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