Prof. Dr. rer. nat. Karen Alim

Telefon

+49 89 289-12192

Raum

036

E-Mail

k.alim@tum.de
frauenbeauftragte@ph.tum.de (Frauenbeauftragte des Physik-Departments)

Links

Homepage
Visitenkarte in TUMonline

Arbeitsgruppe

Theorie biologischer Netzwerke

Funktionen

Mitglied des Fakultätsrats
Frauenbeauftragte des Physik-Departments
Professur für Theorie biologischer Netzwerke

Lehrveranstaltungen und Termine

WS 2022/3 SS 2022 WS 2021/2 SS 2021

Titel und Modulzuordnung
Art	SWS	Dozent(en)	Termine
Fortgeschrittene statistische Physik eLearning-Kurs Zuordnung zu Modulen: NAT3002: Fortgeschrittene statistische Physik / Advanced Statistical Physics
VO	4	Alim, K.	Di, 08:00–10:00, PH 1121 Fr, 10:00–12:00, PH 1121
Aktuelle Entwicklungen zur Physik biologischer Netzwerke Zuordnung zu Modulen: NAT5002m: Aktuelle Entwicklungen zur Physik biologischer Netzwerke für Masterstudierende / Current Developments in Physics of Biological Networks for M.Sc. Students PH6168: Aktuelle Entwicklungen zur Physik biologischer Netzwerke / Current Developments in Physics of Biological Networks
PS	2	Alim, K.	Mi, 10:00–12:00, CPA EG.006B Mi, 10:00–12:00, CPA EG.006B sowie einzelne oder verschobene Termine
Übung zu Fortgeschrittene statistische Physik Zuordnung zu Modulen: NAT3002: Fortgeschrittene statistische Physik / Advanced Statistical Physics
UE	2	Leitung/Koordination: Alim, K.
Journal Club Biological Physics and Morphogenesis Zuordnung zu Modulen: NAT5007g: Journal-Club Biologische Physik und Morphogenese / Journal Club Biological Physics and Morphogenesis
SE	2	Alim, K.	Do, 13:00–15:00, CPA EG.006B sowie einzelne oder verschobene Termine
Repetitorium zu Aktuelle Entwicklungen zur Physik biologischer Netzwerke Zuordnung zu Modulen: NAT5002m: Aktuelle Entwicklungen zur Physik biologischer Netzwerke für Masterstudierende / Current Developments in Physics of Biological Networks for M.Sc. Students
RE	2	Leitung/Koordination: Alim, K.
Tag der Physikerinnen aktuelle Informationen Zuordnung zu Modulen: NAT9005: Tag der Physikerinnen / Tag der Physikerinnen
KO	0.1	Alim, K.	einzelne oder verschobene Termine
Tutorenseminar zu Fortgeschrittene statistische Physik Diese Lehrveranstaltung ist keinem Modul zugeordnet.
SE	2	Alim, K.

Veröffentlichungen

Changing Flows Balance Nutrient Absorption and Bacterial Growth along the Gut: Agnese Codutti (author), Jonas Cremer (author), Karen Alim (author); 2022-09-23; journal article; Physical Review Letters; DOI: 10.1103/PhysRevLett.129.138101
Memory Formation in Adaptive Networks: Komal Bhattacharyya (author), David Zwicker (author), Karen Alim (author); 2022-07-06; journal article; Physical Review Letters; DOI: 10.1103/PhysRevLett.129.028101
Changing flows balance nutrient absorption and bacterial growth along the gut: Agnese Codutti (author), Jonas Cremer (author), Karen Alim (author); 2022-02-18; other; DOI: 10.1101/2022.02.16.480685
Network architecture determines vein fate during spontaneous reorganization, with a time delay: Sophie Marbach (author), Noah Ziethen (author), Leonie Bastin (author), Felix K. Bäuerle (author), Karen Alim (author); 2021-12-30; other; DOI: 10.1101/2021.12.29.474405
Nuclei are mobile processors enabling specialization in a gigantic single-celled syncytium: Tobias Gerber (author), Cristina Loureiro (author), Nico Schramma (author), Siyu Chen (author), Akanksha Jain (author), Anne Weber (author), Anne Weigert (author), Malgorzata Santel (author), Karen Alim (author), Barbara Treutlein (author), J. Gray Camp (author); 2021-04-30; other; DOI: 10.1101/2021.04.29.441915
Encoding memory in tube diameter hierarchy of living flow network: Mirna Kramar (author), Karen Alim (author); 2021-03-09; journal article; Proceedings of the National Academy of Sciences; DOI: 10.1073/pnas.2007815118
Tissue-wide integration of mechanical cues promotes effective auxin patterning: João R. D. Ramos (author), Alexis Maizel (author), Karen Alim (author); 2021-02; journal article; The European Physical Journal Plus; DOI: 10.1140/epjp/s13360-021-01204-6
Emergence of behavior in a self-organized living matter network: Philipp Fleig (author), Mirna Kramar (author), Michael Wilczek (author), Karen Alim (author); 2020-09-08; other; DOI: 10.1101/2020.09.06.285080
Living System Adapts Harmonics of Peristaltic Wave for Cost-Efficient Optimization of Pumping Performance: Felix K. Bäuerle (author), Stefan Karpitschka (author), Karen Alim (author); 2020-03-05; journal article; Physical Review Letters; DOI: 10.1103/PhysRevLett.124.098102
Robust Increase in Supply by Vessel Dilation in Globally Coupled Microvasculature: Felix J. Meigel (author), Peter Cha (author), Michael P. Brenner (author), Karen Alim (author); 2019-11-26; journal article; Physical Review Letters; DOI: 10.1103/PhysRevLett.123.228103
Tissue-wide integration of mechanical cues promotes efficient auxin patterning: João R. D. Ramos (author), Alexis Maizel (author), Karen Alim (author); 2019-10-28; other; DOI: 10.1101/820837
The emergent Yo-yo movement of nuclei driven by collective cytoskeletal remodeling in pseudo-synchronous mitotic cycles: 2019-06-06; other; []; URL: http://dx.doi.org/10.1101/662965; DOI: 10.1101/662965
Order parameter allows classification of planar graphs based on balanced fixed points in the Kuramoto model: 2019-05-23; journal article; Physical Review E; URL: http://dx.doi.org/10.1103/physreve.99.052308; DOI: 10.1103/physreve.99.052308; ISSN: 2470-0045; ISSN: 2470-0053
Controlling effective dispersion within a channel with flow and active walls: 2019-01-08; other; ARXIV: arXiv:1901.03697v1
Oscillatory fluid flow drives scaling of contraction wave with system size: Jean-Daniel Julien (author), Karen Alim (author); 2018-10-16; journal article; Proceedings of the National Academy of Sciences; DOI: 10.1073/pnas.1805981115
Flow rate of transport network controls uniform metabolite supply to tissue: Felix J. Meigel (author), Karen Alim (author); 2018-05-31; journal article; Journal of The Royal Society Interface; DOI: 10.1098/rsif.2018.0075
Fluid flows shaping organism morphology: Karen Alim (author); 2018-05-26; journal article; Philosophical Transactions of the Royal Society B: Biological Sciences; DOI: 10.1098/rstb.2017.0112
Mechanical Model of Nuclei Ordering in Drosophila Embryos Reveals Dilution of Stochastic Forces.: Kaiser F (author), Lv Z (author), Marques Rodrigues D (author), Rosenbaum J (author), Aspelmeier T (author), Großhans J (author), Alim K (author); 2018-04; journal article; Biophysical journal; URL: http://europepmc.org/abstract/med/29642041; PMID: 29642041; DOI: 10.1016/j.bpj.2018.02.018
Local Pore Size Correlations Determine Flow Distributions in Porous Media.: Alim K (author), Parsa S (author), Weitz DA (author), Brenner MP (author); 2017-10; journal article; Physical review letters; URL: http://europepmc.org/abstract/med/29053310; PMID: 29053310; DOI: 10.1103/physrevlett.119.144501
Spatial mapping reveals multi-step pattern of wound healing in Physarum polycephalum: Felix K Bäuerle (author), Mirna Kramar (author), Karen Alim (author); 2017-10; journal article; Journal of Physics D: Applied Physics; DOI: 10.1088/1361-6463/aa8a21; ISSN: 0022-3727
Mechanism of signal propagation in Physarum polycephalum.: Alim K (author), Andrew N (author), Pringle A (author), Brenner MP (author); 2017-05; journal article; Proceedings of the National Academy of Sciences of the United States of America; URL: http://europepmc.org/abstract/med/28465441; PMID: 28465441; PMC: PMC5441820; DOI: 10.1073/pnas.1618114114
Pruning to Increase Taylor Dispersion in Physarum polycephalum Networks.: Marbach S (author), Alim K (author), Andrew N (author), Pringle A (author), Brenner MP (author); 2016-10; journal article; Physical review letters; URL: http://europepmc.org/abstract/med/27824465; PMID: 27824465; DOI: 10.1103/physrevlett.117.178103
Leaf growth is conformal.: Alim K (author), Armon S (author), Shraiman BI (author), Boudaoud A (author); 2016-09; journal article; Physical biology; URL: http://europepmc.org/abstract/med/27597439; PMID: 27597439; DOI: 10.1088/1478-3975/13/5/05lt01
Matrix elasticity of void-forming hydrogels controls transplanted-stem-cell-mediated bone formation.: Huebsch N (author), Lippens E (author), Lee K (author), Mehta M (author), Koshy ST (author), Darnell MC (author), Desai RM (author), Madl CM (author), Xu M (author), Zhao X (author), Chaudhuri O (author), Verbeke C (author), Kim WS (author), Alim K (author), Mammoto A (author), Mooney DJ (author); 2015-09; journal article; Nature materials; URL: http://europepmc.org/abstract/med/26366848; PMID: 26366848; PMC: PMC4654683; DOI: 10.1038/nmat4407
Physarum: Karen Alim (author), Natalie Andrew (author), Anne Pringle (author); 2013; journal article; Current Biology; DOI: 10.1016/j.cub.2013.09.040; ISSN: 0960-9822
Being Squeezed into the Right Place within the Egg Shell: Karen Alim (author); 2013-10; journal article; Biophysical Journal; DOI: 10.1016/j.bpj.2013.09.016; ISSN: 0006-3495
Random network peristalsis in Physarum polycephalum organizes fluid flows across an individual.: Alim K (author), Amselem G (author), Peaudecerf F (author), Brenner MP (author), Pringle A (author); 2013-07; journal article; Proceedings of the National Academy of Sciences of the United States of America; URL: http://europepmc.org/abstract/med/23898203; PMID: 23898203; PMC: PMC3746869; DOI: 10.1073/pnas.1305049110
Regulatory role of cell division rules on tissue growth heterogeneity: Karen Alim (author); 2012; journal article; Frontiers in Plant Science; DOI: 10.3389/fpls.2012.00174; ISSN: 1664-462X
Mechanical stress acts via katanin to amplify differences in growth rate between adjacent cells in Arabidopsis.: Uyttewaal M (author), Burian A (author), Alim K (author), Landrein B (author), Borowska-Wykręt D (author), Dedieu A (author), Peaucelle A (author), Ludynia M (author), Traas J (author), Boudaoud A (author), Kwiatkowska D (author), Hamant O (author); 2012-04; journal article; Cell; URL: http://europepmc.org/abstract/med/22500806; PMID: 22500806; DOI: 10.1016/j.cell.2012.02.048
Quantitative Analysis of the Nanopore Translocation Dynamics of Simple Structured Polynucleotides: Severin Schink (author), Stephan Renner (author), Karen Alim (author), Vera Arnaut (author), Friedrich C. Simmel (author), Ulrich Gerland (author); 2012-01; journal article; Biophysical Journal; DOI: 10.1016/j.bpj.2011.11.4011; ISSN: 0006-3495
Confinement induces conformational transition of semiflexible polymer rings to figure eight form: Katja Ostermeir (author), Karen Alim (author), Erwin Frey (author); 2010; journal article; Soft Matter; DOI: 10.1039/c0sm00290a; ISSN: 1744-683X
Buckling of stiff polymer rings in weak spherical confinement: Katja Ostermeir (author), Karen Alim (author), Erwin Frey (author); 2010-06; journal article; Physical Review E; DOI: 10.1103/physreve.81.061802; ISSN: 1539-3755
Quantitative predictions on auxin-induced polar distribution of PIN proteins during vein formation in leaves.: Alim K (author), Frey E (author); 2010-06; journal article; The European physical journal. E, Soft matter; URL: http://europepmc.org/abstract/med/20571847; PMID: 20571847; DOI: 10.1140/epje/i2010-10604-5
Excluded Volume Effects on Semiflexible Ring Polymers: Fabian Drube (author), Karen Alim (author), Guillaume Witz (author), Giovanni Dietler (author), Erwin Frey (author); 2010-04; journal article; Nano Letters; DOI: 10.1021/nl1003575; ISSN: 1530-6984
Shapes of Semiflexible Polymer Rings: Karen Alim (author), Erwin Frey (author); 2007-11-07; journal article; Physical Review Letters; DOI: 10.1103/physrevlett.99.198102; ISSN: 0031-9007
Fluctuating semiflexible polymer ribbon constrained to a ring.: Alim K (author), Frey E (author); 2007-10; journal article; The European physical journal. E, Soft matter; URL: http://europepmc.org/abstract/med/17992469; PMID: 17992469; DOI: 10.1140/epje/i2007-10228-x

Siehe auch ORCID-Profil von Karen Alim.