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Techniques and Data Analysis in Biophysics 1

Module PH2251

This module handbook serves to describe contents, learning outcome, methods and examination type as well as linking to current dates for courses and module examination in the respective sections.

Module version of WS 2017/8

There are historic module descriptions of this module. A module description is valid until replaced by a newer one.

available module versions
WS 2018/9WS 2017/8SS 2017

Basic Information

PH2251 is a semester module in German or English language at Master’s level which is offered in winter semester.

This Module is included in the following catalogues within the study programs in physics.

  • Specific catalogue of special courses for Biophysics
  • Focus Area Bio-Sensors in M.Sc. Biomedical Engineering and Medical Physics
  • Complementary catalogue of special courses for condensed matter physics
  • Complementary catalogue of special courses for nuclear, particle, and astrophysics
  • Complementary catalogue of special courses for Applied and Engineering Physics

If not stated otherwise for export to a non-physics program the student workload is given in the following table.

Total workloadContact hoursCredits (ECTS)
150 h 30 h 5 CP

Responsible coordinator of the module PH2251 in the version of WS 2017/8 was Friedrich Simmel.

Content, Learning Outcome and Preconditions

Content

  • The measurement of physical processes
    Statistics, measurement uncertainties and error analysis, noise in physical systems, data aquisition (sampling theorem), data filtering
  • Atomic force microscopy (AFM)
    Basics of AFM-based force spectroscopy and Imaging, Instrumentation and data aquisition, data analysis
  • Microfluidics
    Basics, lithography, applications

Learning Outcome

Upon completion of the module, students are able to understand and to utilize basic statistical methods. They are also able to have a critically scrutinize measured data and their apparent uncertainties. Furthermore, the student will be able to utilize noise in physical systems for experiments. After the introduction into data sampling and filtering the students will be to confidently apply the gained knowledge in future experiments. Further on, the students will be able to understand how atomic force microscopy works and how different its applications are. Last but not least, the students will be familiar with lithographic methods and understand the theoretical basics of microfluidics.

Preconditions

No preconditions in addition to the requirements for the Master’s program in Physics.

Courses, Learning and Teaching Methods and Literature

Courses and Schedule

TypeSWSTitleLecturer(s)Dates
VO 2 Techniques and Data Analysis in Biophysics Simmel, F.
Assistants: Pirzer, T.
Fri, 11:00–13:00, ZNN 2.003

Learning and Teaching Methods

The topics of the lecture are presented by oral, power point and blackboard presentation.

The students should independently work on relevant examples from up-to-date research. These will be discussed scientifically with other examples in the lecture. Here, the students should utilize the learning content of the lecture to analyse  and to scientifically evaluate these examples.

In parallel the students should work with text books which can be accompanied by the study of scientific publications.

Media

lecture notes, additional literature, the lecture notes are provided through Moodle

Literature

will be announced in the lecture

Module Exam

Description of exams and course work

There will be an oral exam of 25 minutes duration. Therein the achievement of the competencies given in section learning outcome is tested exemplarily at least to the given cognition level using comprehension questions and sample calculations.

For example an assignment in the exam might be:

  • What is the difference between Nyquist and 1/f noise?
  • What are the imaging regimes in AFM? Explain them!
  • What does double emulsion mean?
  • Choose a hypothesis test and explain it.

Exam Repetition

The exam may be repeated at the end of the semester.

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