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Protein Prediction II for Bioinformaticians (IN2230)

Course 8210934000 in WS 2013/4

General Data

Course Type Lecture w/ Exercise
Semester Weekly Hours 6 SWS
Organisational Unit Informatics 12 - Chair of Bioinformatics (Prof. Rost)
Lecturers
Dates Thu, 12:45–14:15, MI 01.09.034
Thu, 14:15–15:15, MI 01.09.034
Tue, 12:45–14:15, MI 01.09.034

Assignment to Modules

Further Information

Courses are together with exams the building blocks for modules. Please keep in mind that information on the contents, learning outcomes and, especially examination conditions are given on the module level only – see section "Assignment to Modules" above.

additional remarks This lecture continues the 'Protein Prediction' lecture. Topics will include (but not be limited to): * Predicting protein function using sequence: sequence alignments, multiple sequence alignments, motifs, domain assignment, annotation transfer by homology, ab initio predictions. * Predicting protein function using structure: structural alignments, structural motifs, annotation transfer via structure similarity. * From structure prediction to function prediction: comparative modeling; prediction of: secondary structure, hydrophilicity profiles, solvent accessibility, transmembrane segments, disordered regions, contact maps, functional residues; template free modeling. * Machine learning.
Links TUMonline entry

Equivalent Courses (e. g. in other semesters)

SemesterTitleLecturersDates
WS 2022/3 Protein Prediction II for Bioinformaticians (IN2230) Erckert, K. Olenyi, T. Rost, B. Senoner, T. singular or moved dates
WS 2021/2 Protein Prediction II for Bioinformaticians (IN2230) Rost, B. Thu, 12:30–14:00, MI 00.13.009A
Thu, 14:00–16:00, virtuell
Tue, 12:30–14:00, MI 00.13.009A
WS 2020/1 Protein Prediction II for Bioinformaticians (IN2230) Rost, B. Tue, 12:00–14:00, virtuell
Thu, 12:00–14:00, virtuell
Thu, 14:00–16:00, virtuell
WS 2019/20 Protein Prediction II for Bioinformaticians (IN2230) Rost, B. Thu, 12:30–14:00, MI 01.09.034
Thu, 14:00–16:00, MI 01.09.034
Tue, 12:30–14:00, MI 01.09.034
WS 2018/9 Protein Prediction II for Bioinformaticians (IN2230) Rost, B. Tue, 12:30–14:00, MI 01.09.034
Thu, 12:30–14:00, MI 01.09.034
Thu, 14:00–16:00, MI 01.09.034
WS 2017/8 Protein Prediction II for Bioinformaticians (IN2230) Rost, B. Tue, 12:00–14:00, MI 01.09.034
Thu, 12:00–14:00, MI 01.09.034
Thu, 14:00–15:30, MI 01.09.034
WS 2016/7 Protein Prediction II for Bioinformaticians (IN2230) Rost, B. Tue, 12:00–13:30, MI 01.09.034
Thu, 12:00–13:30, MI 01.09.034
Thu, 13:30–15:00, MI 01.09.034
WS 2015/6 Protein Prediction II for Bioinformaticians (IN2230) Tue, 12:00–13:30, MI 01.09.034
Thu, 12:00–13:30, MI 01.09.034
Thu, 13:30–15:00, MI 01.09.034
WS 2014/5 Protein Prediction II for Bioinformaticians (IN2230) Tue, 12:30–14:00, MI 01.09.034
Thu, 12:30–14:00, MI 01.09.034
Thu, 14:00–15:30, MI 01.09.034
WS 2012/3 Protein Prediction II (IN2230)
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